cDNA-AFLP analysis reveals the adaptive responses of citrus to long-term boron-toxicity
Identifieur interne : 000849 ( Main/Exploration ); précédent : 000848; suivant : 000850cDNA-AFLP analysis reveals the adaptive responses of citrus to long-term boron-toxicity
Auteurs : Peng Guo [République populaire de Chine] ; Yi-Ping Qi [République populaire de Chine] ; Lin-Tong Yang [République populaire de Chine] ; Xin Ye [République populaire de Chine] ; Huan-Xin Jiang [République populaire de Chine] ; Jing-Hao Huang [République populaire de Chine] ; Li-Song Chen [République populaire de Chine]Source :
- BMC Plant Biology [ 1471-2229 ] ; 2014.
English descriptors
- KwdEn :
- Adaptation, Physiological, Amplified Fragment Length Polymorphism Analysis (methods), Biological Transport, Boron (toxicity), Cell Wall (genetics), Citrus (drug effects), Citrus (genetics), Citrus (physiology), Citrus sinensis (drug effects), Citrus sinensis (genetics), Citrus sinensis (physiology), Cytoskeleton (genetics), DNA, Complementary, Gene Expression Regulation, Plant, Light, Phosphorus (metabolism), Photosynthesis (genetics), Plant Leaves (drug effects), Plant Leaves (genetics), Plant Leaves (physiology), Seedlings (drug effects), Seedlings (genetics), Seedlings (physiology), Signal Transduction (genetics).
- MESH :
- chemical , metabolism : Phosphorus.
- chemical , toxicity : Boron.
- drug effects : Citrus, Citrus sinensis, Plant Leaves, Seedlings.
- genetics : Cell Wall, Citrus, Citrus sinensis, Cytoskeleton, Photosynthesis, Plant Leaves, Seedlings, Signal Transduction.
- methods : Amplified Fragment Length Polymorphism Analysis.
- physiology : Citrus, Citrus sinensis, Plant Leaves, Seedlings.
- Adaptation, Physiological, Biological Transport, DNA, Complementary, Gene Expression Regulation, Plant, Light.
Abstract
Boron (B)-toxicity is an important disorder in agricultural regions across the world. Seedlings of ‘Sour pummelo’ (
B-toxicity-induced changes in seedlings growth, leaf CO2 assimilation, pigments, total soluble protein, malondialdehyde (MDA) and phosphorus were less pronounced in
The online version of this article (doi:10.1186/s12870-014-0284-5) contains supplementary material, which is available to authorized users.
Url:
DOI: 10.1186/s12870-014-0284-5
PubMed: 25348611
PubMed Central: 4219002
Affiliations:
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Chine</country><wicri:regionArea>Institute of Horticultural Plant Physiology, Biochemistry and Molecular Biology, Fujian Agriculture and Forestry University, Fuzhou</wicri:regionArea><placeName><settlement type="city">Fuzhou</settlement><region type="province">Fujian</region></placeName></affiliation></author><author><name sortKey="Qi, Yi Ping" sort="Qi, Yi Ping" uniqKey="Qi Y" first="Yi-Ping" last="Qi">Yi-Ping Qi</name><affiliation wicri:level="3"><nlm:aff id="Aff3">Institute of Materia Medica, Fujian Academy of Medical Sciences, Fuzhou, 350001 China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Institute of Materia Medica, Fujian Academy of Medical Sciences, Fuzhou</wicri:regionArea><placeName><settlement type="city">Fuzhou</settlement><region type="province">Fujian</region></placeName></affiliation></author><author><name sortKey="Yang, Lin Tong" sort="Yang, Lin Tong" uniqKey="Yang L" first="Lin-Tong" last="Yang">Lin-Tong 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Plant Physiology, Biochemistry and Molecular Biology, Fujian Agriculture and Forestry University, Fuzhou, 350002 China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Institute of Horticultural Plant Physiology, Biochemistry and Molecular Biology, Fujian Agriculture and Forestry University, Fuzhou</wicri:regionArea><placeName><settlement type="city">Fuzhou</settlement><region type="province">Fujian</region></placeName></affiliation><affiliation wicri:level="3"><nlm:aff id="Aff4">College of Life Science, Fujian Agriculture and Forestry University, Fuzhou, 350002 China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>College of Life Science, Fujian Agriculture and Forestry University, Fuzhou</wicri:regionArea><placeName><settlement type="city">Fuzhou</settlement><region type="province">Fujian</region></placeName></affiliation><affiliation wicri:level="3"><nlm:aff id="Aff5">Institute of Fruit Tree Science, 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of Resource and Environmental Science, Fujian Agriculture and Forestry University, Fuzhou, 350002 China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>College of Resource and Environmental Science, Fujian Agriculture and Forestry University, Fuzhou</wicri:regionArea><placeName><settlement type="city">Fuzhou</settlement><region type="province">Fujian</region></placeName></affiliation><affiliation wicri:level="3"><nlm:aff id="Aff2">Institute of Horticultural Plant Physiology, Biochemistry and Molecular Biology, Fujian Agriculture and Forestry University, Fuzhou, 350002 China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Institute of Horticultural Plant Physiology, Biochemistry and Molecular Biology, Fujian Agriculture and Forestry University, Fuzhou</wicri:regionArea><placeName><settlement type="city">Fuzhou</settlement><region type="province">Fujian</region></placeName></affiliation></author><author><name sortKey="Qi, Yi Ping" sort="Qi, Yi Ping" uniqKey="Qi Y" first="Yi-Ping" last="Qi">Yi-Ping Qi</name><affiliation wicri:level="3"><nlm:aff id="Aff3">Institute of Materia Medica, Fujian Academy of Medical Sciences, Fuzhou, 350001 China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Institute of Materia Medica, Fujian Academy of Medical Sciences, Fuzhou</wicri:regionArea><placeName><settlement type="city">Fuzhou</settlement><region type="province">Fujian</region></placeName></affiliation></author><author><name sortKey="Yang, Lin Tong" sort="Yang, Lin Tong" uniqKey="Yang L" first="Lin-Tong" last="Yang">Lin-Tong Yang</name><affiliation wicri:level="3"><nlm:aff id="Aff1">College of Resource and Environmental Science, Fujian Agriculture and Forestry University, Fuzhou, 350002 China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>College of Resource and Environmental Science, Fujian Agriculture and Forestry University, Fuzhou</wicri:regionArea><placeName><settlement type="city">Fuzhou</settlement><region type="province">Fujian</region></placeName></affiliation><affiliation wicri:level="3"><nlm:aff id="Aff2">Institute of Horticultural Plant Physiology, Biochemistry and Molecular Biology, Fujian Agriculture and Forestry University, Fuzhou, 350002 China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Institute of Horticultural Plant Physiology, Biochemistry and Molecular Biology, Fujian Agriculture and Forestry University, Fuzhou</wicri:regionArea><placeName><settlement type="city">Fuzhou</settlement><region type="province">Fujian</region></placeName></affiliation></author><author><name sortKey="Ye, Xin" sort="Ye, Xin" uniqKey="Ye X" first="Xin" last="Ye">Xin Ye</name><affiliation wicri:level="3"><nlm:aff id="Aff1">College of Resource and Environmental Science, Fujian Agriculture and Forestry University, Fuzhou, 350002 China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>College of Resource and Environmental Science, Fujian Agriculture and Forestry University, Fuzhou</wicri:regionArea><placeName><settlement type="city">Fuzhou</settlement><region type="province">Fujian</region></placeName></affiliation></author><author><name sortKey="Jiang, Huan Xin" sort="Jiang, Huan Xin" uniqKey="Jiang H" first="Huan-Xin" last="Jiang">Huan-Xin Jiang</name><affiliation wicri:level="3"><nlm:aff id="Aff2">Institute of Horticultural Plant Physiology, Biochemistry and Molecular Biology, Fujian Agriculture and Forestry University, Fuzhou, 350002 China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Institute of Horticultural Plant Physiology, Biochemistry and Molecular Biology, Fujian Agriculture and Forestry University, Fuzhou</wicri:regionArea><placeName><settlement type="city">Fuzhou</settlement><region type="province">Fujian</region></placeName></affiliation><affiliation wicri:level="3"><nlm:aff id="Aff4">College of Life Science, Fujian Agriculture and Forestry University, Fuzhou, 350002 China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>College of Life Science, Fujian Agriculture and Forestry University, Fuzhou</wicri:regionArea><placeName><settlement type="city">Fuzhou</settlement><region type="province">Fujian</region></placeName></affiliation></author><author><name sortKey="Huang, Jing Hao" sort="Huang, Jing Hao" uniqKey="Huang J" first="Jing-Hao" last="Huang">Jing-Hao Huang</name><affiliation wicri:level="3"><nlm:aff id="Aff2">Institute of Horticultural Plant Physiology, Biochemistry and Molecular Biology, Fujian Agriculture and Forestry University, Fuzhou, 350002 China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Institute of Horticultural Plant Physiology, Biochemistry and Molecular Biology, Fujian Agriculture and Forestry University, Fuzhou</wicri:regionArea><placeName><settlement type="city">Fuzhou</settlement><region type="province">Fujian</region></placeName></affiliation><affiliation wicri:level="3"><nlm:aff id="Aff4">College of Life Science, Fujian Agriculture and Forestry University, Fuzhou, 350002 China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>College of Life Science, Fujian Agriculture and Forestry University, Fuzhou</wicri:regionArea><placeName><settlement type="city">Fuzhou</settlement><region type="province">Fujian</region></placeName></affiliation><affiliation wicri:level="3"><nlm:aff id="Aff5">Institute of Fruit Tree Science, Fujian Academy of Agricultural Sciences, Fuzhou, 350013 China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Institute of Fruit Tree Science, Fujian Academy of Agricultural Sciences, Fuzhou</wicri:regionArea><placeName><settlement type="city">Fuzhou</settlement><region type="province">Fujian</region></placeName></affiliation></author><author><name sortKey="Chen, Li Song" sort="Chen, Li Song" uniqKey="Chen L" first="Li-Song" last="Chen">Li-Song Chen</name><affiliation wicri:level="3"><nlm:aff id="Aff1">College of Resource and Environmental Science, Fujian Agriculture and Forestry University, Fuzhou, 350002 China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>College of Resource and Environmental Science, Fujian Agriculture and Forestry University, Fuzhou</wicri:regionArea><placeName><settlement type="city">Fuzhou</settlement><region type="province">Fujian</region></placeName></affiliation><affiliation wicri:level="3"><nlm:aff id="Aff2">Institute of Horticultural Plant Physiology, Biochemistry and Molecular Biology, Fujian Agriculture and Forestry University, Fuzhou, 350002 China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Institute of Horticultural Plant Physiology, Biochemistry and Molecular Biology, Fujian Agriculture and Forestry University, Fuzhou</wicri:regionArea><placeName><settlement type="city">Fuzhou</settlement><region type="province">Fujian</region></placeName></affiliation><affiliation wicri:level="3"><nlm:aff id="Aff6">Fujian Key Laboratory for Plant Molecular and Cell Biology, Fujian Agriculture and Forestry University, Fuzhou, 350002 China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Fujian Key Laboratory for Plant Molecular and Cell Biology, Fujian Agriculture and Forestry University, Fuzhou</wicri:regionArea><placeName><settlement type="city">Fuzhou</settlement><region type="province">Fujian</region></placeName></affiliation><affiliation wicri:level="3"><nlm:aff id="Aff7">The Higher Educational Key Laboratory of Fujian Province for Soil Ecosystem Health and Regulation, Fujian Agriculture and Forestry University, Fuzhou, 350002 China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>The Higher Educational Key Laboratory of Fujian Province for Soil Ecosystem Health and Regulation, Fujian Agriculture and Forestry University, Fuzhou</wicri:regionArea><placeName><settlement type="city">Fuzhou</settlement><region type="province">Fujian</region></placeName></affiliation></author></analytic><series><title level="j">BMC Plant Biology</title><idno type="eISSN">1471-2229</idno><imprint><date when="2014">2014</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Adaptation, Physiological</term><term>Amplified Fragment Length Polymorphism Analysis (methods)</term><term>Biological Transport</term><term>Boron (toxicity)</term><term>Cell Wall (genetics)</term><term>Citrus (drug effects)</term><term>Citrus (genetics)</term><term>Citrus (physiology)</term><term>Citrus sinensis (drug effects)</term><term>Citrus sinensis (genetics)</term><term>Citrus sinensis (physiology)</term><term>Cytoskeleton (genetics)</term><term>DNA, Complementary</term><term>Gene Expression Regulation, Plant</term><term>Light</term><term>Phosphorus (metabolism)</term><term>Photosynthesis (genetics)</term><term>Plant Leaves (drug effects)</term><term>Plant Leaves (genetics)</term><term>Plant Leaves (physiology)</term><term>Seedlings (drug effects)</term><term>Seedlings (genetics)</term><term>Seedlings (physiology)</term><term>Signal Transduction (genetics)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>Phosphorus</term></keywords><keywords scheme="MESH" type="chemical" qualifier="toxicity" xml:lang="en"><term>Boron</term></keywords><keywords scheme="MESH" qualifier="drug effects" xml:lang="en"><term>Citrus</term><term>Citrus sinensis</term><term>Plant Leaves</term><term>Seedlings</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Cell Wall</term><term>Citrus</term><term>Citrus sinensis</term><term>Cytoskeleton</term><term>Photosynthesis</term><term>Plant Leaves</term><term>Seedlings</term><term>Signal Transduction</term></keywords><keywords scheme="MESH" qualifier="methods" xml:lang="en"><term>Amplified Fragment Length Polymorphism Analysis</term></keywords><keywords scheme="MESH" qualifier="physiology" xml:lang="en"><term>Citrus</term><term>Citrus sinensis</term><term>Plant Leaves</term><term>Seedlings</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Adaptation, Physiological</term><term>Biological Transport</term><term>DNA, Complementary</term><term>Gene Expression Regulation, Plant</term><term>Light</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><sec><title>Background</title><p>Boron (B)-toxicity is an important disorder in agricultural regions across the world. Seedlings of ‘Sour pummelo’ (<italic>Citrus grandis</italic>) and ‘Xuegan’ (<italic>Citrus sinensis</italic>) were fertigated every other day until drip with 10 μM (control) or 400 μM (B-toxic) H<sub>3</sub>BO<sub>3</sub> in a complete nutrient solution for 15 weeks. The aims of this study were to elucidate the adaptive mechanisms of citrus plants to B-toxicity and to identify B-tolerant genes.</p></sec><sec><title>Results</title><p>B-toxicity-induced changes in seedlings growth, leaf CO<sub>2</sub> assimilation, pigments, total soluble protein, malondialdehyde (MDA) and phosphorus were less pronounced in <italic>C. sinensis</italic> than in <italic>C. grandis</italic>. B concentration was higher in B-toxic <italic>C. sinensis</italic> leaves than in B-toxic <italic>C. grandis</italic> ones. Here we successfully used cDNA-AFLP to isolate 67 up-regulated and 65 down-regulated transcript-derived fragments (TDFs) from B-toxic <italic>C. grandis</italic> leaves, whilst only 31 up-regulated and 37 down-regulated TDFs from B-toxic <italic>C. sinensis</italic> ones, demonstrating that gene expression is less affected in B-toxic <italic>C. sinensis</italic> leaves than in B-toxic <italic>C. grandis</italic> ones. These differentially expressed TDFs were related to signal transduction, carbohydrate and energy metabolism, nucleic acid metabolism, protein and amino acid metabolism, lipid metabolism, cell wall and cytoskeleton modification, stress responses and cell transport. The higher B-tolerance of <italic>C. sinensis</italic> might be related to the findings that B-toxic <italic>C. sinensis</italic> leaves had higher expression levels of genes involved in photosynthesis, which might contribute to the higher photosyntheis and light utilization and less excess light energy, and in reactive oxygen species (ROS) scavenging compared to B-toxic <italic>C. grandis</italic> leaves, thus preventing them from photo-oxidative damage. In addition, B-toxicity-induced alteration in the expression levels of genes encoding inorganic pyrophosphatase 1, AT4G01850 and methionine synthase differed between the two species, which might play a role in the B-tolerance of <italic>C. sinensis</italic>.</p></sec><sec><title>Conclusions</title><p><italic>C. sinensis</italic> leaves could tolerate higher level of B than <italic>C. grandis</italic> ones, thus improving the B-tolerance of <italic>C. sinensis</italic> plants. Our findings reveal some novel mechanisms on the tolerance of plants to B-toxicity at the gene expression level.</p></sec><sec><title>Electronic supplementary material</title><p>The online version of this article (doi:10.1186/s12870-014-0284-5) contains supplementary material, which is available to authorized users.</p></sec></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Nable, Ro" uniqKey="Nable R">RO Nable</name></author><author><name sortKey="Banuelos, Gs" uniqKey="Banuelos G">GS Banuelos</name></author><author><name sortKey="Paull, Jg" uniqKey="Paull J">JG Paull</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Papadakis, Ie" uniqKey="Papadakis I">IE Papadakis</name></author><author><name sortKey="Dimassi, Kn" uniqKey="Dimassi K">KN Dimassi</name></author><author><name sortKey="Therios, In" uniqKey="Therios I">IN Therios</name></author></analytic></biblStruct><biblStruct><analytic><author><name 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Jing Hao" sort="Huang, Jing Hao" uniqKey="Huang J" first="Jing-Hao" last="Huang">Jing-Hao Huang</name><name sortKey="Huang, Jing Hao" sort="Huang, Jing Hao" uniqKey="Huang J" first="Jing-Hao" last="Huang">Jing-Hao Huang</name><name sortKey="Huang, Jing Hao" sort="Huang, Jing Hao" uniqKey="Huang J" first="Jing-Hao" last="Huang">Jing-Hao Huang</name><name sortKey="Jiang, Huan Xin" sort="Jiang, Huan Xin" uniqKey="Jiang H" first="Huan-Xin" last="Jiang">Huan-Xin Jiang</name><name sortKey="Jiang, Huan Xin" sort="Jiang, Huan Xin" uniqKey="Jiang H" first="Huan-Xin" last="Jiang">Huan-Xin Jiang</name><name sortKey="Qi, Yi Ping" sort="Qi, Yi Ping" uniqKey="Qi Y" first="Yi-Ping" last="Qi">Yi-Ping Qi</name><name sortKey="Yang, Lin Tong" sort="Yang, Lin Tong" uniqKey="Yang L" first="Lin-Tong" last="Yang">Lin-Tong Yang</name><name sortKey="Yang, Lin Tong" sort="Yang, Lin Tong" uniqKey="Yang L" first="Lin-Tong" last="Yang">Lin-Tong Yang</name><name sortKey="Ye, Xin" sort="Ye, Xin" uniqKey="Ye X" 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